# Life has a shape

Navigate from a complete atom-level prediction into local neighborhoods and directional pairwise uncertainty.

Canonical: https://brightaifuture.com/experiences/life-has-a-shape
Format: experience
Source publication: Not established
Bright publication: 2026-09-06
Substantive update: None recorded

## What you can explore

Navigate from a complete atom-level prediction into local neighborhoods and directional pairwise uncertainty.

## Capabilities and fallback

WebGL2 (enhancement)

HTML (evidence)

JSON (coordinates)

## Limits

Bond connections are inferred for display from element radii and distances.

Local neighborhood views hide more distant atoms, not a biological cleavage.

Rounded values span 0–32 Å; source max metadata is 31.75 Å.

Row i is alignment anchor, column j is residue whose expected position error is estimated.

Not measured motion, a distance measurement, or a guaranteed bound.

Single-chain prediction; not an experimental structure or folding simulation.

pLDDT is local confidence, not confidence in inter-domain arrangement.

## Provenance and history

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## Original sources

- [alphafold-p53-atoms-v6](https://alphafold.ebi.ac.uk/files/AF-P04637-F1-model_v6.pdb)
- [alphafold-p53-pae-v6](https://alphafold.ebi.ac.uk/files/AF-P04637-F1-predicted_aligned_error_v6.json)
- [alphafold-p53-v6](https://alphafold.ebi.ac.uk/files/AF-P04637-F1-model_v6.pdb)

## Continue exploring

- [Seeing the shape of life.](https://brightaifuture.com/discoveries/alphafold)
- [Readable evidence guide](https://brightaifuture.com/evidence)